Lfl_g25510


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g25510

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00172750 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.07 OrthoFinder output from all 47 species
Adi_g011982 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g17458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05070 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g21604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22914 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g32428 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene42699.t1 Aspi01Gene42699 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55584.t1 Aspi01Gene55584 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55586.t1 Aspi01Gene55586 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55587.t1 Aspi01Gene55587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55589.t1 Aspi01Gene55589 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0185.g056668 No alias not classified & original description: CDS=100-1869 0.04 OrthoFinder output from all 47 species
Ceric.21G079300.1 Ceric.21G079300 not classified & original description: pacid=50602615... 0.04 OrthoFinder output from all 47 species
Dcu_g26863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g27110.1 LOC_Os02g27110 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10343795g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_295252g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_58863g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g07570.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp7g07580.2 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Ore_g22731 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g009350.2.1 Solyc09g009350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR009291 Vps62 1006 1168
IPR009291 Vps62 1249 1391
IPR010482 Peroxin 1926 2038
IPR009543 VPS13_VAB 2306 2561
No external refs found!