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  5. Sam_g01442

Sam_g01442


Description : not classified & original description: none


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g01442
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00139690 RIN4,... External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
AT2G17660 No alias RPM1-interacting protein 4 (RIN4) family protein 0.03 OrthoFinder output from all 47 species
AT5G55850 NOI RPM1-interacting protein 4 (RIN4) family protein 0.03 OrthoFinder output from all 47 species
Als_g28506 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Als_g28507 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Als_g50234 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Aob_g07105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60879.t1 RIN4, Aspi01Gene60879 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g034954 No alias not classified & original description: CDS=1-828 0.03 OrthoFinder output from all 47 species
Cba_g05087 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Ehy_g09036 NOI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014701001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01030113001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os04g52950.1 LOC_Os04g52950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g04630 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Msp_g12478 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Solyc09g059430.3.1 RIN4, Solyc09g059430 RIN4 effector-triggered immunity RPM1-interacting factor 0.03 OrthoFinder output from all 47 species
Spa_g14777 NOI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003639_P001 RIN4, Zm00001e003639 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 45 76
No external refs found!