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  5. Sam_g01007

Sam_g01007


Description : not classified & original description: none


Gene families : OG0001488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001488_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g01007
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00107700 EGY1,... Protein modification.peptide maturation.plastid.EGY protease 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00233910 ATEGY2, EGY2,... Protein modification.peptide maturation.plastid.EGY protease 0.02 OrthoFinder output from all 47 species
Adi_g048112 ATEGY3, EGY3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g060840 EGY1 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g04016 ATEGY3, EGY3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10514 EGY1 plastidial protease *(EGY) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07312 EGY1 plastidial protease *(EGY) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11611 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15554 EGY1 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Cre03.g206929 EGY1 Protein modification.peptide maturation.plastid.EGY protease 0.01 OrthoFinder output from all 47 species
Dac_g24885 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g01688 EGY1 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15325 EGY1 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17576 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_19505 ATEGY2, EGY2 Probable zinc metalloprotease EGY2, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os01g04900.1 ATEGY2, EGY2,... plastidial protease (EGY) 0.02 OrthoFinder output from all 47 species
MA_134418g0010 ATEGY2, EGY2 Probable zinc metalloprotease EGY2, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp2g04020.1 ATEGY2, EGY2 plastidial protease (EGY) 0.03 OrthoFinder output from all 47 species
Nbi_g13419 EGY1 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26235 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09642 EGY1 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10559 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09064 EGY1 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13868 ATEGY3, EGY3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021268 EGY1 plastidial protease *(EGY) & original description: CDS=100-1773 0.03 OrthoFinder output from all 47 species
Sam_g17720 No alias plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g019200.4.1 ATEGY2, EGY2,... plastidial protease (EGY) 0.04 OrthoFinder output from all 47 species
Solyc10g081470.2.1 EGY1, Solyc10g081470 plastidial protease (EGY) 0.02 OrthoFinder output from all 47 species
Spa_g00449 EGY1 plastidial protease *(EGY) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!