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  5. Lfl_g25370

Lfl_g25370


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g25370
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00061580 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00251660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
AMTR_s00066p00056580 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AT3G09340 No alias Transmembrane amino acid transporter family protein 0.03 OrthoFinder output from all 47 species
Aop_g31437 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68476 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54749.t1 Aspi01Gene54749 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60271.t1 Aspi01Gene60271 solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0120.g046809 No alias solute transporter *(AAAP) & original description: CDS=42-1736 0.05 OrthoFinder output from all 47 species
Azfi_s0870.g090592 No alias solute transporter *(AAAP) & original description: CDS=69-1490 0.04 OrthoFinder output from all 47 species
Ceric.04G003800.1 Ceric.04G003800 solute transporter *(AAAP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G038800.1 Ceric.31G038800 solute transporter *(AAAP) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.35G020200.1 Ceric.35G020200 solute transporter *(AAAP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G016600.1 Ceric.38G016600 solute transporter *(AAAP) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g19618 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019976001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Ppi_g16581 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017489 No alias solute transporter *(AAAP) & original description: CDS=1-1299 0.03 OrthoFinder output from all 47 species
Smo405495 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Smo438611 No alias Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
Solyc03g013440.4.1 Solyc03g013440 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Spa_g22850 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039154_P004 Zm00001e039154 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 251 634
No external refs found!