1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g25357

Lfl_g25357


Description : mRNA endoribonuclease *(G3BP) & original description: none


Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g25357

Target Alias Description ECC score Gene Family Method Actions
AT5G43960 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.02 OrthoFinder output from all 47 species
AT5G60980 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.03 OrthoFinder output from all 47 species
Als_g50035 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G045600.1 Ceric.39G045600 mRNA endoribonuclease *(G3BP) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.14 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g10558 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04522 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10075 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g059310.3.1 Solyc09g059310 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
Zm00001e014590_P001 Zm00001e014590 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002075 NTF2_dom 18 136
IPR000504 RRM_dom 320 377
No external refs found!