Aob_g42153 (CRR2)


Aliases : CRR2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g42153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00155170 CRR2,... Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00190360 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
AT2G20540 MEF21 mitochondrial editing factor 21 0.03 OrthoFinder output from all 47 species
AT3G62890 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G04780 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G40405 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g021325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13481 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32791 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07022 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14128 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18650 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18790 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19114 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19247 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23879 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30430 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60846 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24197 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14090.t1 Aspi01Gene14090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34740.t1 Aspi01Gene34740 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35417.t1 OTP82, Aspi01Gene35417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49181.t1 Aspi01Gene49181 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000662 No alias not classified & original description: CDS=1-2844 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000981 No alias not classified & original description: CDS=1-2859 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012490 No alias not classified & original description: CDS=1-2382 0.03 OrthoFinder output from all 47 species
Azfi_s0012.g012931 No alias not classified & original description: CDS=1-3024 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025565 No alias not classified & original description: CDS=1-3945 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043395 No alias not classified & original description: CDS=1-2703 0.03 OrthoFinder output from all 47 species
Azfi_s0175.g055975 No alias not classified & original description: CDS=1-4965 0.03 OrthoFinder output from all 47 species
Azfi_s0758.g085492 No alias not classified & original description: CDS=1-2652 0.03 OrthoFinder output from all 47 species
Azfi_s0768.g086029 No alias not classified & original description: CDS=1-2331 0.03 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.02 OrthoFinder output from all 47 species
Cba_g05960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25034 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29991 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35153 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45101 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75118 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G079600.1 OTP84, Ceric.04G079600 not classified & original description: pacid=50631214... 0.02 OrthoFinder output from all 47 species
Ceric.36G033700.1 Ceric.36G033700 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.37G044800.1 Ceric.37G044800 not classified & original description: pacid=50617007... 0.03 OrthoFinder output from all 47 species
Dac_g04916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g05750 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38506 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08045 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17301 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43120 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00984 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Ehy_g04950 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036788001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.03 OrthoFinder output from all 47 species
LOC_Os03g20190.1 LOC_Os03g20190 Pentatricopeptide repeat-containing protein At1g56690,... 0.02 OrthoFinder output from all 47 species
LOC_Os04g38980.1 LOC_Os04g38980 Pentatricopeptide repeat-containing protein At4g39952,... 0.02 OrthoFinder output from all 47 species
Len_g03390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17565 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_724726g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g11487 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48107 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17377 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18050 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04775 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13570 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27694 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18927 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53548 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56584 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63671 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004087 No alias not classified & original description: CDS=796-2982 0.03 OrthoFinder output from all 47 species
Sam_g24540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo34638 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.02 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
Solyc06g053850.4.1 Solyc06g053850 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Spa_g05652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16966 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24933 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e033826_P001 Zm00001e033826 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Zm00001e034903_P001 SLO1, Zm00001e034903 Pentatricopeptide repeat-containing protein At2g22410,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 354 416
IPR002885 Pentatricopeptide_repeat 211 236
IPR002885 Pentatricopeptide_repeat 135 183
IPR002885 Pentatricopeptide_repeat 237 283
IPR002885 Pentatricopeptide_repeat 34 82
IPR032867 DYW_dom 455 543
No external refs found!