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  5. Aob_g41298

Aob_g41298


Description : not classified & original description: none


Gene families : OG0004851 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g41298
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Adi_g025259 CAD6, ATCAD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13916 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Aob_g14173 ATCAD7, CAD7,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g42842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42843 ATCAD7, CAD7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23127 ATCAD7, CAD7,... EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Cba_g78128 CAD5, ATCAD5, CAD-5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06263 ATCAD7, CAD7,... EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0003796 lysozyme activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006027 glycosaminoglycan catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009253 peptidoglycan catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0018580 nitronate monooxygenase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013154 ADH-like_N 36 142
No external refs found!