Lfl_g25093

Description : component *(uS11) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001893 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001893_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g25093
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00104960	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
AT2G36160	No alias	Ribosomal protein S11 family protein	0.03	OrthoFinder output from all 47 species
AT3G52580	No alias	Ribosomal protein S11 family protein	0.04	OrthoFinder output from all 47 species
Adi_g025760	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Ala_g20351	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Aop_g00922	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Azfi_s0015.g013910	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0339.g065604	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001154.44	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
Dac_g08660	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Dcu_g11136	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01021436001	ATTRANS11, TRANS11	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01033877001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	OrthoFinder output from all 47 species
GSVIVT01036096001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
Gb_17067	No alias	component RPS14 of SSU proteome	0.04	OrthoFinder output from all 47 species
LOC_Os02g33140.1	LOC_Os02g33140	component RPS14 of SSU proteome	0.03	OrthoFinder output from all 47 species
Lfl_g19558	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Mp8g03250.1	No alias	component RPS14 of SSU proteome	0.04	OrthoFinder output from all 47 species
Msp_g36870	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Nbi_g30668	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Pp3c15_22240V3.1	Pp3c15_22240	Ribosomal protein S11 family protein	0.03	OrthoFinder output from all 47 species
Pp3c9_21480V3.1	Pp3c9_21480	Ribosomal protein S11 family protein	0.05	OrthoFinder output from all 47 species
Ppi_g60675	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Sam_g17417	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Sam_g35851	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Solyc09g010100.3.1	Solyc09g010100	component RPS14 of SSU proteome	0.02	OrthoFinder output from all 47 species
Spa_g10828	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Spa_g51819	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Tin_g17077	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e022659_P002	Zm00001e022659	component RPS14 of SSU proteome	0.02	OrthoFinder output from all 47 species
Zm00001e030302_P001	Zm00001e030302	component RPS14 of SSU proteome	0.04	OrthoFinder output from all 47 species
Zm00001e030304_P001	Zm00001e030304	component RPS14 of SSU proteome	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	HCCA
MF	GO:0004640	phosphoribosylanthranilate isomerase activity	IEP	HCCA
BP	GO:0006568	tryptophan metabolic process	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006586	indolalkylamine metabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006788	heme oxidation	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
MF	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0042168	heme metabolic process	IEP	HCCA
BP	GO:0042430	indole-containing compound metabolic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001971	Ribosomal_S11	61	179

External Links

No external refs found!

Lfl_g25093

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation