Aob_g40174


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0001886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001886_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g40174

Target Alias Description ECC score Gene Family Method Actions
AT2G47410 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.02 OrthoFinder output from all 47 species
AT5G49430 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.05 OrthoFinder output from all 47 species
Adi_g002754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074760 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Adi_g077954 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aev_g13611 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aev_g18824 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ala_g21580 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Als_g02628 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g29268 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g48705 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene19687.t1 Aspi01Gene19687 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53113.t1 Aspi01Gene53113 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0256.g060562 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Cba_g17526 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g23760 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.1Z073200.1 Ceric.1Z073200 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.30 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Cre02.g078150 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g03214 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dcu_g12050 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g07149 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
GSVIVT01028117001 No alias Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01035014001 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Gb_35200 No alias Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Len_g10488 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Len_g29840 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Lfl_g11003 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Lfl_g38764 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_10430074g0010 No alias Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
MA_58934g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g00710.1 No alias Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Msp_g38962 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g44688 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ore_g16125 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g07557 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g13827 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g22962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08815 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g16205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g060040.3.1 Solyc01g060040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g060050.3.1 Solyc01g060050 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Solyc01g079510.3.1 Solyc01g079510 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Spa_g47528 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Tin_g20120 No alias substrate adaptor of CUL4-based E3 ubiquiTin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e025834_P004 Zm00001e025834 Dynein assembly factor with WDR repeat domains 1... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 1594 1652
IPR001680 WD40_repeat 27 52
IPR001680 WD40_repeat 205 244
No external refs found!