1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g25028

Lfl_g25028


Description : not classified & original description: none


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g25028
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Aop_g56919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g60197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g60198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043731 No alias not classified & original description: CDS=1-1527 0.02 OrthoFinder output from all 47 species
Len_g11152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_1840174g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g15840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g040960.1.1 Solyc07g040960 Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g062680.1.1 Solyc08g062680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 251 407
No external refs found!