Aob_g39107

Description : translation initiation factor *(IF-3) & original description: none

Gene families : OG0001945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001945_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g39107

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00137p00042790	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.05	OrthoFinder output from all 47 species
AT2G24060	No alias	Translation initiation factor 3 protein	0.03	OrthoFinder output from all 47 species
Adi_g025876	No alias	translation initiation factor *(IF-3) & original...	0.04	OrthoFinder output from all 47 species
Aev_g11375	No alias	translation initiation factor *(IF-3) & original...	0.06	OrthoFinder output from all 47 species
Azfi_s0095.g043623	No alias	translation initiation factor *(IF-3) & original...	0.03	OrthoFinder output from all 47 species
Cba_g03761	No alias	translation initiation factor *(IF-3) & original...	0.04	OrthoFinder output from all 47 species
LOC_Os02g55120.1	LOC_Os02g55120	IF-3 translation initiation factor	0.02	OrthoFinder output from all 47 species
Len_g15141	No alias	translation initiation factor *(IF-3) & original...	0.06	OrthoFinder output from all 47 species
Lfl_g37528	No alias	translation initiation factor *(IF-3) & original...	0.03	OrthoFinder output from all 47 species
MA_18402g0010	No alias	Translation initiation factor IF3-2, chloroplastic...	0.02	OrthoFinder output from all 47 species
Nbi_g00833	No alias	translation initiation factor *(IF-3) & original...	0.03	OrthoFinder output from all 47 species
Ore_g07395	No alias	translation initiation factor *(IF-3) & original...	0.05	OrthoFinder output from all 47 species
Pnu_g10213	No alias	translation initiation factor *(IF-3) & original...	0.04	OrthoFinder output from all 47 species
Ppi_g00723	No alias	translation initiation factor *(IF-3) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019815	Translation_initiation_fac_3_C	253	337
IPR019814	Translation_initiation_fac_3_N	175	243

External Links

No external refs found!

Aob_g39107

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation