Cpa|evm.model.tig00000842.2


Description : 27.1 RNA.processing ATP-dependent RNA helicase, putative


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00000842.2
Cluster HCCA cluster: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT1G26370 No alias RNA helicase family protein 0.01 Gene family
AT1G32490 ESP3, EMB2733 RNA helicase family protein 0.01 Gene family
AT3G26560 No alias ATP-dependent RNA helicase, putative 0.01 Gene family
Cre07.g349100 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.03 Gene family
Cre08.g358563 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.03 Gene family
Cre11.g467654 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.01 Gene family
Cre24.g755347 No alias 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.01 Gene family
GSVIVT01021163001 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
GSVIVT01028153001 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
LOC_Os03g19960 Os03g0314100 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.01 Gene family
LOC_Os06g23530 Os06g0343100 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.01 Gene family
LOC_Os07g32430 Os07g0508000 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.02 Gene family
MA_34468g0010 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Solyc03g115390.3.1 Solyc03g115390.3 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.01 Gene family
Solyc09g097820.3.1 Solyc09g097820.3 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Solyc10g076910.2.1 Solyc10g076910.2 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.02 Gene family
Zm00001d015893 GRMZM2G029258 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.02 Gene family
Zm00001d028923 GRMZM2G385931 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.01 Gene family
Zm00001d039380 GRMZM2G305060 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
Zm00001d049980 GRMZM2G121776 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 26 178
IPR011709 DUF1605 656 744
IPR001650 Helicase_C 292 388
IPR007502 Helicase-assoc_dom 451 552
No external refs found!