Aob_g37342


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g37342

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00185560 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00067180 EMB2261,... Pentatricopeptide repeat-containing protein At2g46050,... 0.02 OrthoFinder output from all 47 species
AT4G16470 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g012320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022409 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g065393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g28662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42153 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02536.t1 Aspi01Gene02536 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04308.t1 Aspi01Gene04308 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36242.t1 VAC1, ECB2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41775.t2 Aspi01Gene41775 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71957.t1 EMB2261, Aspi01Gene71957 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72317.t1 Aspi01Gene72317 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012368 No alias not classified & original description: CDS=1-2025 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g013865 No alias not classified & original description: CDS=1-1626 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.04 OrthoFinder output from all 47 species
Azfi_s0889.g091250 No alias not classified & original description: CDS=1-2652 0.03 OrthoFinder output from all 47 species
Cba_g03394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07743 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13970 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20164 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20828 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35153 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45997 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.02 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.03 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.03 OrthoFinder output from all 47 species
Ceric.18G077100.1 Ceric.18G077100 not classified & original description: pacid=50621411... 0.06 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.02 OrthoFinder output from all 47 species
Ceric.28G062700.1 Ceric.28G062700 not classified & original description: pacid=50570794... 0.04 OrthoFinder output from all 47 species
Ceric.28G068300.1 DOT4, Ceric.28G068300 not classified & original description: pacid=50570176... 0.03 OrthoFinder output from all 47 species
Ceric.29G070800.1 Ceric.29G070800 not classified & original description: pacid=50625555... 0.03 OrthoFinder output from all 47 species
Ceric.38G015500.1 Ceric.38G015500 not classified & original description: pacid=50579581... 0.03 OrthoFinder output from all 47 species
Dac_g22189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08759 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08760 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08946 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23896 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28915 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12280 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023345001 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Len_g03910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19657 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_286190g0010 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05274 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31269 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57347 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g03353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23429 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06373 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32250 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015486 No alias not classified & original description: CDS=1-1653 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015944 CRR22 not classified & original description: CDS=122-4345 0.02 OrthoFinder output from all 47 species
Sam_g40196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo47998 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
Smo61782 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g01102 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20369 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 587 610
IPR002885 Pentatricopeptide_repeat 284 307
IPR002885 Pentatricopeptide_repeat 680 710
IPR002885 Pentatricopeptide_repeat 208 253
IPR002885 Pentatricopeptide_repeat 511 558
IPR002885 Pentatricopeptide_repeat 310 357
IPR002885 Pentatricopeptide_repeat 411 457
IPR002885 Pentatricopeptide_repeat 613 659
IPR002885 Pentatricopeptide_repeat 108 155
No external refs found!