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  5. Cpa|evm.model.tig00020780.48

Cpa|evm.model.tig00020780.48


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020780.48
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00010p00252990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00019p00256850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00109p00061950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.02 Archaeplastida
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.02 Archaeplastida
AT5G65230 AtMYB53, MYB53 myb domain protein 53 0.02 Archaeplastida
Cpa|evm.model.tig00021038.78 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Cre16.g677382 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011436001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01035663001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_11536 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_30719 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.02 Archaeplastida
LOC_Os01g12860.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os01g18240.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g15020.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g13570.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g33070.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp1g08640.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp1g24520.1 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.01 Archaeplastida
Pp3c10_10240V3.1 No alias Homeodomain-like protein 0.02 Archaeplastida
Pp3c15_24080V3.1 No alias myb domain protein 33 0.01 Archaeplastida
Pp3c23_7530V3.1 No alias myb domain protein 77 0.02 Archaeplastida
Pp3c24_11770V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c9_24170V3.1 No alias myb domain protein 33 0.02 Archaeplastida
Solyc02g082040.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc03g119050.4.1 No alias component SNAPC4 of SNAP snRNA transcription factor complex 0.01 Archaeplastida
Solyc08g068320.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc10g005240.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e014203_P004 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e016403_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018193_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020371_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e031356_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e040265_P001 No alias transcription factor (MYB) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 27 74
No external refs found!