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  5. Aob_g36877

Aob_g36877 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g36877

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
Adi_g004061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036683 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057083 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096184 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07418 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09002 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15360 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G042200.1 Ceric.07G042200 not classified & original description: pacid=50626031... 0.02 OrthoFinder output from all 47 species
Dac_g20347 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15684 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01563 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30607 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16300 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32866 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005912 No alias not classified & original description: CDS=1-3210 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007750 No alias not classified & original description: CDS=1-1920 0.04 OrthoFinder output from all 47 species
Sam_g34646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.02 OrthoFinder output from all 47 species
Spa_g08239 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20412 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 369 399
IPR002885 Pentatricopeptide_repeat 341 365
IPR002885 Pentatricopeptide_repeat 240 262
IPR002885 Pentatricopeptide_repeat 441 464
IPR002885 Pentatricopeptide_repeat 63 111
IPR002885 Pentatricopeptide_repeat 164 213
IPR002885 Pentatricopeptide_repeat 265 312
IPR046848 E_motif 484 545
No external refs found!