MA_14427g0010


Description : 29.1 protein.aa activation polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. ubiquitin 11 (UBQ11)


Gene families : OG_01_0000152 (Gene family) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_14427g0010
Cluster HCCA cluster: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.76 No alias 29.5.11.1 protein.degradation.ubiquitin.ubiquitin... 0.01 Gene family
MA_100402g0010 No alias 29.5.11.1 protein.degradation.ubiquitin.ubiquitin... 0.03 Gene family
MA_455989g0010 No alias 29.5.11 protein.degradation.ubiquitin Encodes a... 0.02 Gene family
MA_46617g0010 No alias 29.1 protein.aa activation encodes ubiquitin that is... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 79 150
No external refs found!