Aob_g36308 (emb1138)

Aliases : emb1138

Description : group-II intron splicing RNA helicase *(RH3) & original description: none

Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g36308
Cluster	HCCA: Cluster_160

Target	Alias	Description	ECC score	Gene Family Method
AT3G22330	PMH2, ATRH53	putative mitochondrial RNA helicase 2	0.04	OrthoFinder output from all 47 species
Adi_g055950	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aev_g09590	PRH75	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene72752.t1	PRH75, Aspi01Gene72752	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_09373	PRH75	DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia...	0.04	OrthoFinder output from all 47 species
LOC_Os03g61220.1	emb1138, LOC_Os03g61220	RH3 plastidial RNA basal splicing factor	0.02	OrthoFinder output from all 47 species
Lfl_g06681	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.02	OrthoFinder output from all 47 species
Pp3c24_12420V3.1	Pp3c24_12420	DEAD box RNA helicase (PRH75)	0.01	OrthoFinder output from all 47 species
Solyc12g006320.3.1	PMH2, ATRH53,...	RNA helicase (PMH)	0.05	OrthoFinder output from all 47 species
Zm00001e006243_P001	emb1138, Zm00001e006243	RH3 plastidial RNA basal splicing factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	360	468
IPR012562	GUCT	555	652
IPR011545	DEAD/DEAH_box_helicase_dom	151	320

External Links

No external refs found!