Description : component *(uS19) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0002650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002650_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Lfl_g24533 | |
Cluster | HCCA: Cluster_120 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00022p00076070 | RPS15,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
AT1G04270 | RPS15 | cytosolic ribosomal protein S15 | 0.04 | OrthoFinder output from all 47 species | |
AT5G09510 | No alias | Ribosomal protein S19 family protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g120609 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g67230 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0132.g049172 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0242.g059794 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z099000.1 | Ceric.1Z099000 | component *(uS19) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020830.61 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Cre08.g360900 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g47858 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01000754001 | RPS15 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Gb_16516 | No alias | component RPS15 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g58430.1 | LOC_Os03g58430 | component RPS15 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g08660.1 | LOC_Os07g08660 | component RPS15 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Len_g03057 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Msp_g39280 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
Pp3c3_23700V3.1 | Pp3c3_23700 | Ribosomal protein S19 family protein | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0060.g015225 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g38072 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Smo172403 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g082000.3.1 | RPS15, Solyc02g082000 | component RPS15 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g083370.3.1 | RPS15, Solyc09g083370 | component RPS15 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Spa_g03572 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g10752 | No alias | component *(uS19) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e011449_P001 | Zm00001e011449 | component RPS15 of SSU proteome | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005506 | iron ion binding | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002222 | Ribosomal_S19 | 50 | 135 |
No external refs found! |