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  5. Aob_g34197

Aob_g34197 (ATCAT6, CAT6)


Aliases : ATCAT6, CAT6

Description : cationic amino acid transporter *(CAT) & original description: none


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g34197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00035p00052900 CAT5,... Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
AT5G04770 ATCAT6, CAT6 cationic amino acid transporter 6 0.03 OrthoFinder output from all 47 species
Adi_g020823 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Als_g42144 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.06 OrthoFinder output from all 47 species
Aop_g12751 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene15711.t1 CAT7, Aspi01Gene15711 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g20216 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g32351 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
LOC_Os01g11160.1 CAT5, LOC_Os01g11160 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45950.2 ATCAT6, CAT6,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
MA_470779g0010 ATCAT6, CAT6 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Nbi_g04310 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Pp3c20_7420V3.1 AAT1, CAT1, Pp3c20_7420 amino acid transporter 1 0.02 OrthoFinder output from all 47 species
Ppi_g63432 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
Solyc02g070280.3.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Solyc11g006710.2.1 CAT7, Solyc11g006710 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Spa_g47899 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Tin_g15660 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e005030_P001 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Zm00001e030690_P001 CAT8, Zm00001e030690 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Zm00001e039396_P004 ATCAT6, CAT6,... cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 40 484
IPR029485 CAT_C 523 571
No external refs found!