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  5. Lfl_g24440

Lfl_g24440 (ATMRP12, MRP12, ABCC11)


Aliases : ATMRP12, MRP12, ABCC11

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g24440

Target Alias Description ECC score Gene Family Method Actions
Als_g27611 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12503 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13434 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000681.7 ABCC1, ATABCC1,... ABC transporter C family member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g04801 MRP10, ATMRP10, ABCC14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g036480.2.1 ATMRP14, ABCC10,... ABC transporter C family member 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e008672_P001 EST3, MRP4,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 490 640
IPR011527 ABC1_TM_dom 161 420
No external refs found!