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  5. Aob_g33703

Aob_g33703 (HTA6)


Aliases : HTA6

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g33703

Target Alias Description ECC score Gene Family Method Actions
Adi_g019584 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37648 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11673 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25369.t1 HTA6, Aspi01Gene25369 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40787.t1 HTA6, Aspi01Gene40787 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56417.t1 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01576 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.4 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder output from all 47 species
Dac_g12240 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10226 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g02300.1 HTA12, LOC_Os05g02300 histone (H2A) 0.05 OrthoFinder output from all 47 species
LOC_Os08g33100.1 HTA2, LOC_Os08g33100 histone (H2A) 0.03 OrthoFinder output from all 47 species
Lfl_g04463 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64775 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65929 HTA13 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28142 HTA2 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g099410.3.1 HTA7, Solyc01g099410 histone (H2A) 0.03 OrthoFinder output from all 47 species
Solyc06g084430.4.1 GAMMA-H2AX,... histone (H2A) 0.03 OrthoFinder output from all 47 species
Solyc09g082710.3.1 GAMMA-H2AX,... histone (H2A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 13 92
IPR032454 Histone_H2A_C 95 128
No external refs found!