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  5. Aob_g33023

Aob_g33023


Description : not classified & original description: none


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g33023
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00210920 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G35960 NHL12 NDR1/HIN1-like 12 0.05 OrthoFinder output from all 47 species
AT4G09590 NHL22 NDR1/HIN1-like 22 0.04 OrthoFinder output from all 47 species
AT5G06330 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Aspi01Gene07845.t1 NHL10, YLS9,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_00667 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58850.1 NHL10, YLS9,... NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g06260.1 LOC_Os12g06260 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g21770 NHL25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10155182g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10429254g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10429254g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_112233g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_180376g0010 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_182952g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_27406g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_564044g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_669170g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_71979g0010 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g02160.1 NHL10, YLS9, ATNHL10 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp6g19740.1 NHL10, YLS9, ATNHL10 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc02g081450.2.1 Solyc02g081450 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g121620.1.1 Solyc03g121620 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g081980.2.1 NHL3, Solyc10g081980 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g069970.1.1 Solyc11g069970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e014749_P001 Zm00001e014749 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e025983_P001 Zm00001e025983 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033176 proton-transporting V-type ATPase complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 168 270
No external refs found!