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  5. Lfl_g24298

Lfl_g24298


Description : not classified & original description: none


Gene families : OG0000103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g24298
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Ala_g27027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g44503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12587 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g15860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g25906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g00517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 12 90
No external refs found!