AMTR_s00027p00238760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00027.134

Description : RNA biosynthesis.transcriptional activation.OFP transcription factor


Gene families : OG_01_0000130 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000130_tree ,
OG_02_0000050 (LandPlants) Phylogenetic Tree(s): OG_02_0000050_tree ,
OG_03_0000302 (SeedPlants) Phylogenetic Tree(s): OG_03_0000302_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00027p00238760
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Gb_22142 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g36990.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os07g48150.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os08g01190.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e000448_P001 No alias transcription factor (OFP) 0.05 Archaeplastida
Zm00001e004736_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e007176_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e019825_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
AMTR_s00030p00235460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.03 LandPlants
Gb_22142 No alias transcription factor (OFP) 0.02 LandPlants
LOC_Os03g06350.1 No alias transcription factor (OFP) 0.01 LandPlants
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.03 LandPlants
LOC_Os05g36990.1 No alias transcription factor (OFP) 0.02 LandPlants
LOC_Os07g48150.1 No alias transcription factor (OFP) 0.02 LandPlants
LOC_Os08g01190.1 No alias transcription factor (OFP) 0.03 LandPlants
Solyc02g085500.4.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e000448_P001 No alias transcription factor (OFP) 0.05 LandPlants
Zm00001e007176_P001 No alias transcription factor (OFP) 0.02 LandPlants
Zm00001e019825_P001 No alias transcription factor (OFP) 0.02 LandPlants
Zm00001e032149_P001 No alias transcription factor (OFP) 0.01 LandPlants
AMTR_s00030p00235460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.03 SeedPlants
LOC_Os03g06350.1 No alias transcription factor (OFP) 0.01 SeedPlants
LOC_Os05g36990.1 No alias transcription factor (OFP) 0.02 SeedPlants
LOC_Os08g01190.1 No alias transcription factor (OFP) 0.03 SeedPlants
LOC_Os12g06150.1 No alias transcription factor (OFP) 0.01 SeedPlants
Solyc06g074020.2.1 No alias transcription factor (OFP) 0.01 SeedPlants
Solyc09g082080.1.1 No alias transcription factor (OFP) 0.01 SeedPlants
Solyc11g006670.1.1 No alias transcription factor (OFP) 0.01 SeedPlants
Zm00001e000448_P001 No alias transcription factor (OFP) 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006458 Ovate_C 184 241
No external refs found!