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  5. Lfl_g24168

Lfl_g24168 (RD2)


Aliases : RD2

Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g24168
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT2G21620 RD2 Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G58450 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g012300 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38455 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g57128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g00478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017725001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01022496001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_05096 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_05132 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g63010.1 LOC_Os01g63010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g47620.1 LOC_Os07g47620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g00411 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_111185g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_34981g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_57598g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g58299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g066810.4.1 Solyc01g066810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g054270.2.1 Solyc05g054270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g086670.2.1 Solyc10g086670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g099520.3.1 Solyc12g099520 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g08218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04358 RD2 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 36 176
No external refs found!