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  5. MA_140124g0010

MA_140124g0010


Description : 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. beta-D-xylosidase 4 (XYL4)


Gene families : OG_01_0000215 (Gene family) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_140124g0010
Cluster HCCA cluster: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT5G49360 ATBXL1, BXL1 beta-xylosidase 1 0.03 Gene family
AT5G64570 XYL4, ATBXL4 beta-D-xylosidase 4 0.1 Gene family
GSVIVT01009003001 No alias 10.6.2 cell... 0.02 Gene family
GSVIVT01017659001 No alias 10.6.2 cell... 0.01 Gene family
GSVIVT01035033001 No alias 10.6.2 cell... 0.03 Gene family
LOC_Os11g18730 Os11g0291450,... 10.6.2 cell... 0.02 Gene family
MA_99945g0010 No alias 10.6.2 cell... 0.02 Gene family
Solyc04g072850.3.1 Solyc04g072850.3 10.6.2 cell... 0.02 Gene family
Solyc11g044910.2.1 Solyc11g044910.2 10.6.2 cell... 0.04 Gene family
Zm00001d002853 GRMZM2G177923 10.6.2 cell... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 372 592
IPR001764 Glyco_hydro_3_N 83 325
IPR026891 Fn3-like 657 723
No external refs found!