1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g30670

Aob_g30670 (AtMYB109, MYB109)


Aliases : AtMYB109, MYB109

Description : not classified & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g30670

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00256850 AtMYB3R4,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00186p00015620 BW52, ATMYB52,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.02 OrthoFinder output from all 47 species
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.03 OrthoFinder output from all 47 species
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 OrthoFinder output from all 47 species
Aev_g01341 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aev_g01523 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aev_g03283 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g12161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12163 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aob_g18554 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aop_g07117 MYB3R-3, AtMYB3R3 R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08938 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene27436.t1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63601.t1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene66011.t1 MYB77, Aspi01Gene66011 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014830 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.07 OrthoFinder output from all 47 species
Azfi_s0103.g044681 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Cre01.g034350 PGA37, ATMYB118, MYB118 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Dcu_g21214 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.05 OrthoFinder output from all 47 species
Ehy_g05817 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.06 OrthoFinder output from all 47 species
Ehy_g10489 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g12904 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.05 OrthoFinder output from all 47 species
Ehy_g12960 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g18783 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ehy_g24773 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009566001 MYB70, AtMYB70 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
GSVIVT01026481001 BW52, ATMYB52, MYB52 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_24073 MYB77 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Len_g12579 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Lfl_g28242 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
MA_948059g0010 ATMYB3R5, MYB3R-5 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Mp5g13060.1 ATMYB3R5, MYB3R-5 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp8g11870.1 AtMYB117, LOF1, MYB117 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Msp_g11561 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Nbi_g12490 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Nbi_g44161 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ore_g27825 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pnu_g08134 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24702 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Tin_g19510 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Zm00001e030480_P001 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 111 157
IPR001005 SANT/Myb 209 248
No external refs found!