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  5. Aob_g30189

Aob_g30189 (KNAT3)


Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g30189

Target Alias Description ECC score Gene Family Method Actions
Dcu_g36820 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os08g19650.1 KNAT3, LOC_Os08g19650 transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Ore_g07720 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29053 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001775 BUM1, SHL, STM,... KNOX-type transcription factor & original description: CDS=1-1104 0.03 OrthoFinder output from all 47 species
Tin_g30670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 351 390
IPR005541 KNOX2 205 251
IPR005540 KNOX1 143 181
No external refs found!