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  5. Aob_g30085

Aob_g30085 (HSI2, VAL1)


Aliases : HSI2, VAL1

Description : LAV-VAL-type transcription factor & original description: none


Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g30085
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cre13.g562400 HSI2, VAL1 B3 domain-containing transcription repressor VAL1... 0.01 OrthoFinder output from all 47 species
Dcu_g16113 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05727 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_10850V3.1 HSL1, VAL2,... HSI2-like 1 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018964 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo88108 HSI2, VAL1 RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
Solyc06g082520.3.1 HSI2, VAL1,... transcription factor (LAV-VAL) 0.04 OrthoFinder output from all 47 species
Zm00001e035857_P002 HSL1, VAL2,... transcription factor (LAV-VAL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR011124 Znf_CW 743 785
IPR003340 B3_DNA-bd 472 571
No external refs found!