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  5. Aob_g30059

Aob_g30059


Description : not classified & original description: none


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g30059
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00085750 evm_27.TU.AmTr_v1... Protein ALP1-like OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.08 OrthoFinder output from all 47 species
AT5G12010 No alias unknown protein; INVOLVED IN: response to salt stress;... 0.04 OrthoFinder output from all 47 species
Adi_g030966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g129679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04527 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g08311 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14039 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07409 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26805 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g56919 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g60197 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g60198 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08000.t1 Aspi01Gene08000 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene14487.t1 Aspi01Gene14487 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27928.t1 Aspi01Gene27928 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47954.t1 Aspi01Gene47954 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g10827 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g28438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g20915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035416001 No alias Protein ALP1-like OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os01g40070.1 LOC_Os01g40070 Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.06 OrthoFinder output from all 47 species
LOC_Os05g51520.1 LOC_Os05g51520 Protein ALP1-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g11152 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g48929 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_7435g0010 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g11559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03122 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011625 No alias not classified & original description: CDS=1-1443 0.02 OrthoFinder output from all 47 species
Solyc07g040960.1.1 Solyc07g040960 Protein ALP1-like OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc08g062680.1.1 Solyc08g062680 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc12g009000.1.1 Solyc12g009000 Protein ALP1-like OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Spa_g04326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04327 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g07912 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g07473 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 249 405
No external refs found!