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Description : E3 ubiquitin ligase & original description: none
Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aob_g28677 | |
| Cluster | HCCA: Cluster_151 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g047333 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10797 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32250 | No alias | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g11530 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18599 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene41677.t1 | Aspi01Gene41677 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene48179.t1 | Aspi01Gene48179 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0149.g053237 | No alias | E3 ubiquitin ligase & original description: CDS=1-2427 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g72117 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G024200.1 | Ceric.34G024200 | E3 ubiquitin ligase & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g03085 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g47007 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01655 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g08554 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_13676 | No alias | U-box domain-containing protein 62 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g14730.1 | No alias | U-box domain-containing protein 62 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10111 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g12773 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19335 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g37224 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01053 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g05354 | No alias | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g08509 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g49248 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12947 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16841 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05129 | No alias | E3 ubiquiTin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23558 | No alias | E3 ubiquiTin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0015711 | organic anion transport | IEP | HCCA |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | HCCA |
| BP | GO:0015743 | malate transport | IEP | HCCA |
| BP | GO:0015849 | organic acid transport | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| BP | GO:0046942 | carboxylic acid transport | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| MF | GO:0140612 | DNA damage sensor activity | IEP | HCCA |
| MF | GO:0140664 | ATP-dependent DNA damage sensor activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |