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  5. Aob_g28649

Aob_g28649


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28649
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Aev_g38515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09077 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10785 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27293 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g28220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50134 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_153011g0010 MEF1 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
MA_59599g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Sam_g07135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo138948 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.03 OrthoFinder output from all 47 species
Smo444974 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Spa_g21106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 199 246
IPR002885 Pentatricopeptide_repeat 402 450
IPR002885 Pentatricopeptide_repeat 502 550
IPR002885 Pentatricopeptide_repeat 376 401
IPR002885 Pentatricopeptide_repeat 173 196
IPR002885 Pentatricopeptide_repeat 275 300
IPR002885 Pentatricopeptide_repeat 577 601
IPR002885 Pentatricopeptide_repeat 303 331
No external refs found!