Aob_g28608


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28608
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266930 OTP81 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Adi_g001917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035312 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g042866 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095301 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17904 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46730 CRR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g13481 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17019 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g15305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23407 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27007 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31716 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g34218 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04806.t1 Aspi01Gene04806 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13883.t1 Aspi01Gene13883 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0034.g025337 DOT4 not classified & original description: CDS=145-3054 0.05 OrthoFinder output from all 47 species
Azfi_s0065.g035795 No alias not classified & original description: CDS=1-2223 0.04 OrthoFinder output from all 47 species
Azfi_s0219.g058621 No alias not classified & original description: CDS=1-3672 0.07 OrthoFinder output from all 47 species
Cba_g07170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g33742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g65097 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G061700.1 Ceric.07G061700 not classified & original description: pacid=50626878... 0.03 OrthoFinder output from all 47 species
Ceric.07G061800.1 Ceric.07G061800 not classified & original description: pacid=50627604... 0.06 OrthoFinder output from all 47 species
Ceric.20G001900.1 Ceric.20G001900 not classified & original description: pacid=50565969... 0.06 OrthoFinder output from all 47 species
Ceric.20G008800.1 Ceric.20G008800 not classified & original description: pacid=50566037... 0.05 OrthoFinder output from all 47 species
Ceric.20G079700.1 DOT4, Ceric.20G079700 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.24G019600.1 Ceric.24G019600 not classified & original description: pacid=50629269... 0.03 OrthoFinder output from all 47 species
Ceric.27G070400.1 CRR22, Ceric.27G070400 not classified & original description: pacid=50605716... 0.03 OrthoFinder output from all 47 species
Ceric.33G052800.1 Ceric.33G052800 not classified & original description: pacid=50607149... 0.03 OrthoFinder output from all 47 species
Dac_g04265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04286 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g08183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35950 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50134 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22321 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g38218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06075 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09249 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032950001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Len_g04345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
Nbi_g06939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05196 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09944 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43235 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04226 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08620 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g22129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22601 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23555 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006756 CRR22 not classified & original description: CDS=1-1713 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017838 No alias component *(CAL) of NADH dehydrogenase carbonic... 0.02 OrthoFinder output from all 47 species
Sam_g08926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo77659 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Spa_g05105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g27928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42246 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17413 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31798 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35682 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033826_P001 Zm00001e033826 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 225 271
IPR002885 Pentatricopeptide_repeat 123 168
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 198 221
IPR002885 Pentatricopeptide_repeat 97 119
IPR046848 E_motif 343 403
No external refs found!