Aob_g28594 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28594

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00048330 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
AT3G13770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g094457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099198 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06729 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22600 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05696 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05758 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05916 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07448 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15487 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16416 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27362 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009229 No alias not classified & original description: CDS=1-2601 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015073 No alias not classified & original description: CDS=1-2832 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015711 No alias not classified & original description: CDS=1-3111 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025102 No alias not classified & original description: CDS=1-3510 0.03 OrthoFinder output from all 47 species
Azfi_s0047.g030252 No alias not classified & original description: CDS=1-2775 0.04 OrthoFinder output from all 47 species
Azfi_s0051.g031470 No alias not classified & original description: CDS=1-1512 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037861 No alias not classified & original description: CDS=1-1125 0.03 OrthoFinder output from all 47 species
Azfi_s0102.g044446 No alias not classified & original description: CDS=1-741 0.03 OrthoFinder output from all 47 species
Azfi_s0277.g061496 No alias not classified & original description: CDS=1-2121 0.03 OrthoFinder output from all 47 species
Cba_g04038 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16998 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20779 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g66831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G026900.1 Ceric.11G026900 not classified & original description: pacid=50595788... 0.03 OrthoFinder output from all 47 species
Ceric.27G053200.1 Ceric.27G053200 not classified & original description: pacid=50604881... 0.04 OrthoFinder output from all 47 species
Ceric.29G017900.1 Ceric.29G017900 not classified & original description: pacid=50624370... 0.02 OrthoFinder output from all 47 species
Ceric.31G059600.1 Ceric.31G059600 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g09065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15109 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18405 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30279 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32771 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36005 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43234 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19270 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38407 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38677 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43242 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43323 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16425 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23999 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48000 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50292 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010647001 SLO1 Pentatricopeptide repeat-containing protein At2g22410,... 0.02 OrthoFinder output from all 47 species
GSVIVT01015087001 CRR2 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
GSVIVT01018262001 No alias Pentatricopeptide repeat-containing protein At2g44880... 0.02 OrthoFinder output from all 47 species
GSVIVT01029347001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os06g12510.1 LOC_Os06g12510 Pentatricopeptide repeat-containing protein At5g15300... 0.02 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58768 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_2991g0010 No alias RNA editing factor (MEF12) 0.03 OrthoFinder output from all 47 species
MA_30949g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_34492g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g03152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04377 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18814 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28789 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g29564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g40748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02390 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12230 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57727 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53964 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59345 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g04996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g43221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g009790.4.1 Solyc09g009790 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g12945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25939 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07560 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14871 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17885 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26742 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e028330_P001 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 97 119
IPR002885 Pentatricopeptide_repeat 197 220
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 124 169
IPR002885 Pentatricopeptide_repeat 224 270
IPR002885 Pentatricopeptide_repeat 324 371
No external refs found!