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  5. Aob_g28215

Aob_g28215 (ATARI2, ARI2)


Aliases : ATARI2, ARI2

Description : RBR-Ariadne-class E3 ubiquitin ligase & original description: none


Gene families : OG0005213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28215

Target Alias Description ECC score Gene Family Method Actions
MA_87115g0020 ATARI2, ARI2 RBR-Ariadne-class E3 ubiquitin ligase 0.02 OrthoFinder output from all 47 species
Mp2g15500.1 ATARI2, ARI2 RBR-Ariadne-class E3 ubiquitin ligase 0.01 OrthoFinder output from all 47 species
Msp_g09317 ATARI2, ARI2 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.04 OrthoFinder output from all 47 species
Zm00001e012428_P001 ATARI1, ARI1,... RBR-Ariadne-class E3 ubiquitin ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR045840 Ariadne 347 572
IPR002867 IBR_dom 208 270
No external refs found!