Aob_g28175


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Aev_g17642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46412 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24747 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g26997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0232.g059290 No alias not classified & original description: CDS=1-3606 0.06 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g22711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_03545 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.04 OrthoFinder output from all 47 species
LOC_Os02g50280.1 CRR22, LOC_Os02g50280 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Ore_g09943 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 226 255
IPR002885 Pentatricopeptide_repeat 334 358
IPR002885 Pentatricopeptide_repeat 198 220
IPR002885 Pentatricopeptide_repeat 434 458
IPR002885 Pentatricopeptide_repeat 258 306
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 122 170
IPR002885 Pentatricopeptide_repeat 359 406
No external refs found!