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  5. Aob_g27587

Aob_g27587 (WIP2, NTT)


Aliases : WIP2, NTT

Description : C2H2 subclass WIP transcription factor & original description: none


Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g27587

Target Alias Description ECC score Gene Family Method Actions
Aop_g29352 WIP4 C2H2 subclass WIP transcription factor & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01009046001 TT1, WIP1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os06g40960.1 WIP2, NTT, LOC_Os06g40960 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Pp3c15_17790V3.1 WIP2, NTT, Pp3c15_17790 C2H2-type zinc finger family protein 0.01 OrthoFinder output from all 47 species
Ppi_g11963 WIP2, NTT C2H2 subclass WIP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc06g074360.4.1 WIP3, Solyc06g074360 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 207 226
No external refs found!