Aob_g27293


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g27293

Target Alias Description ECC score Gene Family Method Actions
Adi_g013260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42177 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g25768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28649 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g39832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07474 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26341 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27362 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07542.t2 Aspi01Gene07542 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65777.t1 Aspi01Gene65777 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g35670 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432670g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g15863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41077 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g22409 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04699 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27180 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g29098 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 123
IPR002885 Pentatricopeptide_repeat 177 224
IPR002885 Pentatricopeptide_repeat 379 426
IPR002885 Pentatricopeptide_repeat 483 513
IPR002885 Pentatricopeptide_repeat 455 480
IPR002885 Pentatricopeptide_repeat 281 308
IPR002885 Pentatricopeptide_repeat 253 277
IPR002885 Pentatricopeptide_repeat 556 578
IPR002885 Pentatricopeptide_repeat 151 173
IPR002885 Pentatricopeptide_repeat 584 614
IPR002885 Pentatricopeptide_repeat 656 680
IPR002885 Pentatricopeptide_repeat 354 377
IPR046848 E_motif 699 761
No external refs found!