Aob_g27016


Description : not classified & original description: none


Gene families : OG0000490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000490_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g27016
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Aop_g04260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16547.t1 Aspi01Gene16547 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27519.t1 Aspi01Gene27519 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27603.t1 Aspi01Gene27603 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70951.t1 Aspi01Gene70951 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70952.t1 Aspi01Gene70952 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70958.t1 Aspi01Gene70958 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000133.50 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.125 No alias No description available 0.02 OrthoFinder output from all 47 species
Nbi_g16877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 562 642
IPR002110 Ankyrin_rpt 958 1041
IPR002110 Ankyrin_rpt 1050 1110
IPR002110 Ankyrin_rpt 662 753
IPR002110 Ankyrin_rpt 874 937
IPR011646 KAP_P-loop 1593 1697
IPR011646 KAP_P-loop 1260 1423
No external refs found!