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  5. Aob_g27004

Aob_g27004 (OTP84)


Aliases : OTP84

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0010123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g27004

Target Alias Description ECC score Gene Family Method Actions
Ceric.39G013000.1 Ceric.39G013000 not classified & original description: pacid=50583026... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0034511 U3 snoRNA binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 461 489
IPR002885 Pentatricopeptide_repeat 731 755
IPR002885 Pentatricopeptide_repeat 258 286
IPR002885 Pentatricopeptide_repeat 630 653
IPR002885 Pentatricopeptide_repeat 832 855
IPR002885 Pentatricopeptide_repeat 557 605
IPR002885 Pentatricopeptide_repeat 358 405
IPR002885 Pentatricopeptide_repeat 758 804
IPR002885 Pentatricopeptide_repeat 658 702
IPR032867 DYW_dom 972 1062
IPR046848 E_motif 874 936
No external refs found!