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  5. Aob_g26990

Aob_g26990


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g26990
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Aop_g11871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.07 OrthoFinder output from all 47 species
LOC_Os02g49830.1 LOC_Os02g49830 Pentatricopeptide repeat-containing protein At3g22690... 0.05 OrthoFinder output from all 47 species
LOC_Os04g53630.1 LOC_Os04g53630 Pentatricopeptide repeat-containing protein At3g20730... 0.03 OrthoFinder output from all 47 species
MA_81105g0010 REME1 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Ore_g36349 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Smo121365 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
Tin_g04368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 229 277
IPR002885 Pentatricopeptide_repeat 330 377
IPR002885 Pentatricopeptide_repeat 129 176
IPR002885 Pentatricopeptide_repeat 532 580
IPR046848 E_motif 650 712
IPR002885 Pentatricopeptide_repeat 296 327
IPR002885 Pentatricopeptide_repeat 607 631
IPR002885 Pentatricopeptide_repeat 103 124
IPR002885 Pentatricopeptide_repeat 434 459
No external refs found!