Aob_g26956 (RCA)

Aliases : RCA

Description : ATP-dependent activase involved in RuBisCo regulation & original description: none

Gene families : OG0001509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001509_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g26956

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00255830	RCA,...	Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat...	0.01	OrthoFinder output from all 47 species
AT2G39730	RCA	rubisco activase	0.03	OrthoFinder output from all 47 species
Adi_g007841	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Adi_g060599	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Adi_g079810	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Ala_g04126	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Ala_g06980	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Als_g03717	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Als_g07530	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Aop_g12628	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Aop_g12629	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene66678.t1	RCA, Aspi01Gene66678	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Azfi_s0001.g000197	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Cba_g02574	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Cba_g15232	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Ceric.12G094300.1	RCA, Ceric.12G094300	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Ceric.12G094500.1	RCA, Ceric.12G094500	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Ceric.12G094700.1	RCA, Ceric.12G094700	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Ceric.12G094800.1	RCA, Ceric.12G094800	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Ceric.28G001900.1	RCA, Ceric.28G001900	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Ceric.28G002100.1	RCA, Ceric.28G002100	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Dac_g08800	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Dac_g13179	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Dcu_g18051	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Dcu_g42046	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.05	OrthoFinder output from all 47 species
Dde_g08345	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Dde_g18636	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Ehy_g15758	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
GSVIVT01024910001	RCA	Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat...	0.02	OrthoFinder output from all 47 species
GSVIVT01034123001	RCA	Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat...	0.02	OrthoFinder output from all 47 species
Gb_37968	RCA	ATP-dependent activase involved in RuBisCo regulation	0.02	OrthoFinder output from all 47 species
Len_g17744	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Len_g24593	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Lfl_g10261	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Lfl_g23813	RCA	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10433855g0010	RCA	ATP-dependent activase involved in RuBisCo regulation	0.01	OrthoFinder output from all 47 species
Mp3g03990.1	RCA	ATP-dependent activase involved in RuBisCo regulation	0.03	OrthoFinder output from all 47 species
Msp_g06782	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Msp_g10333	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Nbi_g09928	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Pir_g23735	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Pir_g41355	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Ppi_g24643	RCA	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g28274	No alias	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Sam_g28275	No alias	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Smo268623	RCA	Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat...	0.01	OrthoFinder output from all 47 species
Solyc10g086580.2.1	RCA, Solyc10g086580	ATP-dependent activase involved in RuBisCo regulation	0.03	OrthoFinder output from all 47 species
Spa_g05667	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Spa_g05668	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Spa_g29802	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Tin_g03996	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species
Tin_g07636	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	164	306

External Links

No external refs found!

Aob_g26956 (RCA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation