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  5. Aob_g26093

Aob_g26093


Description : not classified & original description: none


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g26093
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00036450 evm_27.TU.AmTr_v1... Patellin-4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G22530 PATL2 PATELLIN 2 0.03 OrthoFinder output from all 47 species
AT1G30690 No alias Sec14p-like phosphatidylinositol transfer family protein 0.03 OrthoFinder output from all 47 species
AT1G72150 PATL1 PATELLIN 1 0.02 OrthoFinder output from all 47 species
AT1G72160 No alias Sec14p-like phosphatidylinositol transfer family protein 0.04 OrthoFinder output from all 47 species
Adi_g077645 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g38820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09471 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g40895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000569001 No alias Patellin-6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01028342001 No alias Patellin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01036782001 No alias Patellin-4 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os05g27820.1 LOC_Os05g27820 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g45990.2 LOC_Os06g45990 Patellin-4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_19741g0010 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9244g0010 No alias Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g16700.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Mp4g16720.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g17352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007915 No alias not classified & original description: CDS=438-2087 0.02 OrthoFinder output from all 47 species
Solyc02g070210.3.1 Solyc02g070210 Patellin-4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g064940.3.1 Solyc06g064940 Patellin-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e019109_P003 Zm00001e019109 Patellin-5 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e026912_P001 Zm00001e026912 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e031729_P005 Zm00001e031729 Patellin-5 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
BP GO:0019310 inositol catabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0050113 inositol oxygenase activity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR011074 CRAL/TRIO_N_dom 278 308
IPR001251 CRAL-TRIO_dom 341 503
No external refs found!