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  5. Aob_g25756

Aob_g25756


Description : not classified & original description: none


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g25756

Target Alias Description ECC score Gene Family Method Actions
AT1G14460 No alias AAA-type ATPase family protein 0.03 OrthoFinder output from all 47 species
AT4G24790 No alias AAA-type ATPase family protein 0.02 OrthoFinder output from all 47 species
Adi_g011973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081418 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34236 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26223 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15458 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21375 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51975 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09714 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17546 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18308 STI not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g19008 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29780 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28236.t1 Aspi01Gene28236 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28237.t1 Aspi01Gene28237 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025896 No alias not classified & original description: CDS=287-3238 0.03 OrthoFinder output from all 47 species
Ceric.14G036000.1 STI, Ceric.14G036000 not classified & original description: pacid=50633102... 0.04 OrthoFinder output from all 47 species
Ceric.23G075900.1 STI, Ceric.23G075900 not classified & original description: pacid=50610074... 0.03 OrthoFinder output from all 47 species
Dac_g01794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43950 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05768 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021264001 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023130001 STI Protein STICHEL OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_17581 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g02670.1 LOC_Os08g02670 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g13990.1 STI, LOC_Os11g13990 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g10670.1 STI, LOC_Os12g10670 Protein STICHEL OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g54134 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05036 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436694g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13342 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14718 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g26781 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39999 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27279 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58662 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60107 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010235 STI not classified & original description: CDS=1-3498 0.02 OrthoFinder output from all 47 species
Sam_g29404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo2945 STI Protein STICHEL OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g102810.3.1 STI, Solyc01g102810 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g072090.2.1 Solyc02g072090 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g04713 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12357 STI not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g01269 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09165 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007784_P001 Zm00001e007784 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e019639_P005 STI, Zm00001e019639 Protein STICHEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e019906_P002 Zm00001e019906 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e032180_P001 Zm00001e032180 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e039775_P001 STI, Zm00001e039775 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 753 881
No external refs found!