1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g25747

Aob_g25747 (SIP2, AtSIP2)


Aliases : SIP2, AtSIP2

Description : not classified & original description: none


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g25747

Target Alias Description ECC score Gene Family Method Actions
Aev_g08844 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17039 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21107 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38472 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32731 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02833 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16033 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08515 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016774_P001 SIP1, Zm00001e016774 raffinose synthase 0.02 OrthoFinder output from all 47 species
Zm00001e033100_P002 SIP2, AtSIP2,... raffinose alpha-galactosidase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 130 897
No external refs found!