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  5. Aob_g25729

Aob_g25729


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g25729

Target Alias Description ECC score Gene Family Method Actions
Adi_g019345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 315 341
IPR002885 Pentatricopeptide_repeat 595 643
IPR002885 Pentatricopeptide_repeat 525 574
IPR002885 Pentatricopeptide_repeat 353 402
IPR002885 Pentatricopeptide_repeat 665 714
IPR002885 Pentatricopeptide_repeat 253 294
IPR002885 Pentatricopeptide_repeat 494 523
IPR002885 Pentatricopeptide_repeat 459 488
No external refs found!