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  5. Aob_g25024

Aob_g25024 (APUM4, PUM4)


Aliases : APUM4, PUM4

Description : not classified & original description: none


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g25024

Target Alias Description ECC score Gene Family Method Actions
Als_g37314 APUM6, PUM6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15251 APUM2, PUM2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g008490.3.1 APUM4, PUM4,... Pumilio homolog 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g41737 PUM5, APUM5 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 1 29
IPR001313 Pumilio_RNA-bd_rpt 112 142
IPR001313 Pumilio_RNA-bd_rpt 33 64
IPR001313 Pumilio_RNA-bd_rpt 67 101
No external refs found!