Aob_g24321 (TIR1)


Aliases : TIR1

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g24321

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00126140 AFB2,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT5G49980 AFB5 auxin F-box protein 5 0.03 OrthoFinder output from all 47 species
Adi_g001615 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Adi_g014124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023634 AFB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04857 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ala_g05126 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Als_g07783 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Als_g18642 TIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28117 AFB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00736 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17403.t1 COI1, Aspi01Gene17403 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048837 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Cba_g01293 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Cba_g37430 COI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g70260 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Dde_g01652 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.05 OrthoFinder output from all 47 species
Ehy_g01586 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.05 OrthoFinder output from all 47 species
Ehy_g02828 COI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03881 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
GSVIVT01009126001 AFB5 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_07237 COI1 Coronatine-insensitive protein homolog 1b OS=Oryza... 0.03 OrthoFinder output from all 47 species
Gb_37967 COI1 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Len_g13483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19165 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
MA_10436355g0010 COI1 Coronatine-insensitive protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_78902g0010 AFB5 component TIR1/AFB of auxin receptor complex 0.03 OrthoFinder output from all 47 species
MA_92309g0010 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Mp2g26590.1 COI1 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species
Mp6g02750.1 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Msp_g00647 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.06 OrthoFinder output from all 47 species
Pnu_g18805 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Pnu_g27800 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010765 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013019 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Smo75487 AFB1, ATGRH1, GRH1 Phytohormones.jasmonic acid.perception and signal... 0.03 OrthoFinder output from all 47 species
Smo84100 COI1 Coronatine-insensitive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc05g009260.1.1 TIR1, Solyc05g009260 Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc09g074520.3.1 TIR1, Solyc09g074520 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Spa_g15540 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Zm00001e008324_P001 AFB2, Zm00001e008324 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e023831_P001 Zm00001e023831 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Zm00001e026935_P001 COI1, Zm00001e026935 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Zm00001e027505_P001 TIR1, Zm00001e027505 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 90 136
IPR041567 COI1_F-box 32 70
No external refs found!