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  5. Aob_g23987

Aob_g23987


Description : not classified & original description: none


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g23987

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00082650 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G64590 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G23420 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G50130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g055045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16465.t1 Aspi01Gene16465 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24658.t1 Aspi01Gene24658 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33954.t1 Aspi01Gene33954 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52075.t1 Aspi01Gene52075 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56850.t1 Aspi01Gene56850 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G014400.1 Ceric.33G014400 not classified & original description: pacid=50607635... 0.02 OrthoFinder output from all 47 species
Dcu_g25457 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g48352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025521001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
GSVIVT01028900001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
LOC_Os04g22380.1 LOC_Os04g22380 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
MA_10432182g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
MA_24622g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g07055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo228800 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc08g082870.3.1 Solyc08g082870 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g10057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036623_P001 Zm00001e036623 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 35 181
No external refs found!