AMTR_s00027p00143800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00027.45

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED10 component


Gene families : OG_01_0005616 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005616_tree ,
OG_02_0005422 (LandPlants) Phylogenetic Tree(s): OG_02_0005422_tree ,
OG_03_0005218 (SeedPlants) Phylogenetic Tree(s): OG_03_0005218_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00027p00143800
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g35920.1 No alias component MED10 of middle module of MEDIATOR... 0.02 Archaeplastida
LOC_Os09g35920.1 No alias component MED10 of middle module of MEDIATOR... 0.02 LandPlants
Gb_36353 No alias component MED10 of middle module of MEDIATOR... 0.02 SeedPlants
LOC_Os09g35920.1 No alias component MED10 of middle module of MEDIATOR... 0.02 SeedPlants
MA_9040127g0010 No alias component MED10 of middle module of MEDIATOR... 0.02 SeedPlants
Zm00001e034784_P001 No alias component MED10 of middle module of MEDIATOR... 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006357 regulation of transcription by RNA polymerase II IEA Interproscan
CC GO:0016592 mediator complex IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019145 Mediator_Med10 30 146
No external refs found!